Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL11A2P13942 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.49■■□□□ 1.67
COL11A2P13942 AL135905.2-201ENST00000584934 1404 ntBASIC25.49■■□□□ 1.67
COL11A2P13942 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.49■■□□□ 1.67
COL11A2P13942 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL11A2P13942 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.49■■□□□ 1.67
COL11A2P13942 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.49■■□□□ 1.67
COL11A2P13942 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.48■■□□□ 1.67
COL11A2P13942 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.48■■□□□ 1.67
COL11A2P13942 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.48■■□□□ 1.67
COL11A2P13942 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.48■■□□□ 1.67
COL11A2P13942 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.48■■□□□ 1.67
COL11A2P13942 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.48■■□□□ 1.67
COL11A2P13942 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.48■■□□□ 1.67
COL11A2P13942 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.48■■□□□ 1.67
COL11A2P13942 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL11A2P13942 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.47■■□□□ 1.67
COL11A2P13942 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL11A2P13942 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL11A2P13942 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL11A2P13942 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.47■■□□□ 1.67
COL11A2P13942 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL11A2P13942 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL11A2P13942 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL11A2P13942 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.46■■□□□ 1.67
COL11A2P13942 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 PRKY-204ENST00000533551 1019 ntBASIC25.46■■□□□ 1.67
COL11A2P13942 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.46■■□□□ 1.67
COL11A2P13942 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.46■■□□□ 1.67
COL11A2P13942 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
COL11A2P13942 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
COL11A2P13942 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.46■■□□□ 1.67
COL11A2P13942 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.46■■□□□ 1.67
COL11A2P13942 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL11A2P13942 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL11A2P13942 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL11A2P13942 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
COL11A2P13942 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.45■■□□□ 1.66
COL11A2P13942 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
COL11A2P13942 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL11A2P13942 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL11A2P13942 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
COL11A2P13942 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
COL11A2P13942 AC120498.8-201ENST00000614275 531 ntBASIC25.45■■□□□ 1.66
COL11A2P13942 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.45■■□□□ 1.66
COL11A2P13942 AC006557.6-201ENST00000623071 864 ntBASIC25.45■■□□□ 1.66
COL11A2P13942 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
COL11A2P13942 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
COL11A2P13942 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL11A2P13942 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL11A2P13942 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
COL11A2P13942 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
COL11A2P13942 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
COL11A2P13942 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
COL11A2P13942 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL11A2P13942 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL11A2P13942 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.44■■□□□ 1.66
COL11A2P13942 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.44■■□□□ 1.66
COL11A2P13942 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.44■■□□□ 1.66
COL11A2P13942 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.44■■□□□ 1.66
COL11A2P13942 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.44■■□□□ 1.66
COL11A2P13942 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
COL11A2P13942 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.44■■□□□ 1.66
COL11A2P13942 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL11A2P13942 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
COL11A2P13942 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL11A2P13942 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL11A2P13942 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL11A2P13942 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
COL11A2P13942 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.43■■□□□ 1.66
COL11A2P13942 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.43■■□□□ 1.66
COL11A2P13942 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL11A2P13942 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL11A2P13942 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.43■■□□□ 1.66
COL11A2P13942 KRT18P35-201ENST00000510488 1269 ntBASIC25.43■■□□□ 1.66
COL11A2P13942 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.43■■□□□ 1.66
COL11A2P13942 CD177P1-201ENST00000606252 935 ntBASIC25.43■■□□□ 1.66
COL11A2P13942 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL11A2P13942 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL11A2P13942 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.42■■□□□ 1.66
COL11A2P13942 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.42■■□□□ 1.66
COL11A2P13942 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL11A2P13942 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.42■■□□□ 1.66
COL11A2P13942 TMPOP1-202ENST00000424642 1267 ntBASIC25.42■■□□□ 1.66
COL11A2P13942 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL11A2P13942 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
COL11A2P13942 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms