Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 AL353807.1-201ENST00000427475 662 ntBASIC20.5■□□□□ 0.87
SP9P0CG40 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SP9P0CG40 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.5■□□□□ 0.87
SP9P0CG40 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.5■□□□□ 0.87
SP9P0CG40 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.5■□□□□ 0.87
SP9P0CG40 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SP9P0CG40 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP9P0CG40 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP9P0CG40 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.5■□□□□ 0.87
SP9P0CG40 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.5■□□□□ 0.87
SP9P0CG40 AC079598.2-202ENST00000546624 1451 ntBASIC20.5■□□□□ 0.87
SP9P0CG40 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP9P0CG40 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SP9P0CG40 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.49■□□□□ 0.87
SP9P0CG40 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.49■□□□□ 0.87
SP9P0CG40 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.49■□□□□ 0.87
SP9P0CG40 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.49■□□□□ 0.87
SP9P0CG40 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.49■□□□□ 0.87
SP9P0CG40 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SP9P0CG40 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP9P0CG40 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.49■□□□□ 0.87
SP9P0CG40 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP9P0CG40 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.49■□□□□ 0.87
SP9P0CG40 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SP9P0CG40 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP9P0CG40 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SP9P0CG40 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SP9P0CG40 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SP9P0CG40 TERF1P1-201ENST00000311003 1181 ntBASIC20.48■□□□□ 0.87
SP9P0CG40 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.48■□□□□ 0.87
SP9P0CG40 AL137013.1-201ENST00000432946 1228 ntBASIC20.48■□□□□ 0.87
SP9P0CG40 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.48■□□□□ 0.87
SP9P0CG40 KRT16P5-201ENST00000455284 522 ntBASIC20.48■□□□□ 0.87
SP9P0CG40 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.48■□□□□ 0.87
SP9P0CG40 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
SP9P0CG40 AP000525.1-201ENST00000608286 694 ntBASIC20.48■□□□□ 0.87
SP9P0CG40 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SP9P0CG40 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SP9P0CG40 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SP9P0CG40 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SP9P0CG40 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.48■□□□□ 0.87
SP9P0CG40 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.47■□□□□ 0.87
SP9P0CG40 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 AC116050.2-201ENST00000612102 1779 ntBASIC20.47■□□□□ 0.87
SP9P0CG40 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.47■□□□□ 0.87
SP9P0CG40 UNC93B2-201ENST00000285383 730 ntBASIC20.47■□□□□ 0.87
SP9P0CG40 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.47■□□□□ 0.87
SP9P0CG40 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 AC087388.1-201ENST00000571370 1112 ntBASIC20.47■□□□□ 0.87
SP9P0CG40 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.47■□□□□ 0.87
SP9P0CG40 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SP9P0CG40 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.47■□□□□ 0.87
SP9P0CG40 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SP9P0CG40 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.47■□□□□ 0.87
SP9P0CG40 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.47■□□□□ 0.87
SP9P0CG40 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SP9P0CG40 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SP9P0CG40 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SP9P0CG40 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
SP9P0CG40 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
SP9P0CG40 MIR1238-201ENST00000408483 83 ntBASIC20.46■□□□□ 0.87
SP9P0CG40 DUX4L26-201ENST00000489078 1255 ntBASIC20.46■□□□□ 0.87
SP9P0CG40 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.46■□□□□ 0.87
SP9P0CG40 AC073195.1-201ENST00000607241 877 ntBASIC20.46■□□□□ 0.87
SP9P0CG40 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SP9P0CG40 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SP9P0CG40 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.45■□□□□ 0.87
SP9P0CG40 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 AC073508.3-201ENST00000619697 1419 ntBASIC20.45■□□□□ 0.86
SP9P0CG40 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.45■□□□□ 0.86
SP9P0CG40 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SP9P0CG40 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SP9P0CG40 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms