Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC1P07992 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.18■□□□□ 0.5
ERCC1P07992 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC1P07992 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 AC080038.1-201ENST00000611274 1154 ntBASIC18.18■□□□□ 0.5
ERCC1P07992 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC1P07992 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC1P07992 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC1P07992 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC1P07992 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC1P07992 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ERCC1P07992 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC1P07992 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC1P07992 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.17■□□□□ 0.5
ERCC1P07992 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.17■□□□□ 0.5
ERCC1P07992 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC1P07992 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC1P07992 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC1P07992 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC1P07992 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC1P07992 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.16■□□□□ 0.5
ERCC1P07992 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC1P07992 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC1P07992 AC104187.1-201ENST00000607510 612 ntBASIC18.16■□□□□ 0.5
ERCC1P07992 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERCC1P07992 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC1P07992 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC1P07992 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC1P07992 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ERCC1P07992 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC1P07992 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC1P07992 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC1P07992 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC1P07992 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC1P07992 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC1P07992 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC1P07992 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC1P07992 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC1P07992 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC1P07992 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC1P07992 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERCC1P07992 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.14■□□□□ 0.49
ERCC1P07992 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.14■□□□□ 0.49
ERCC1P07992 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
ERCC1P07992 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
ERCC1P07992 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.14■□□□□ 0.49
ERCC1P07992 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
ERCC1P07992 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ERCC1P07992 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.14■□□□□ 0.49
ERCC1P07992 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERCC1P07992 AC055733.4-201ENST00000638462 1354 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms