Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.92■■□□□ 1.1
RB1P06400 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.92■■□□□ 1.1
RB1P06400 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
RB1P06400 PRKY-204ENST00000533551 1019 ntBASIC21.92■■□□□ 1.1
RB1P06400 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.92■■□□□ 1.1
RB1P06400 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.92■■□□□ 1.1
RB1P06400 AC012306.2-201ENST00000609350 630 ntBASIC21.92■■□□□ 1.1
RB1P06400 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RB1P06400 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
RB1P06400 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RB1P06400 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.91■■□□□ 1.1
RB1P06400 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.91■■□□□ 1.1
RB1P06400 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.91■■□□□ 1.1
RB1P06400 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RB1P06400 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RB1P06400 AL390719.1-204ENST00000412397 1219 ntBASIC21.91■■□□□ 1.1
RB1P06400 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.91■■□□□ 1.1
RB1P06400 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.91■■□□□ 1.1
RB1P06400 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.91■■□□□ 1.1
RB1P06400 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RB1P06400 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.91■■□□□ 1.1
RB1P06400 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RB1P06400 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RB1P06400 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RB1P06400 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.9■■□□□ 1.1
RB1P06400 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RB1P06400 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.9■■□□□ 1.1
RB1P06400 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RB1P06400 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.9■■□□□ 1.1
RB1P06400 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.9■■□□□ 1.1
RB1P06400 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RB1P06400 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RB1P06400 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RB1P06400 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.9■■□□□ 1.1
RB1P06400 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RB1P06400 AC006557.6-201ENST00000623071 864 ntBASIC21.9■■□□□ 1.1
RB1P06400 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.9■■□□□ 1.1
RB1P06400 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RB1P06400 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RB1P06400 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RB1P06400 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RB1P06400 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.89■■□□□ 1.09
RB1P06400 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RB1P06400 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RB1P06400 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RB1P06400 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RB1P06400 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
RB1P06400 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.89■■□□□ 1.09
RB1P06400 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.89■■□□□ 1.09
RB1P06400 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.89■■□□□ 1.09
RB1P06400 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RB1P06400 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RB1P06400 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.89■■□□□ 1.09
RB1P06400 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.89■■□□□ 1.09
RB1P06400 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.89■■□□□ 1.09
RB1P06400 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RB1P06400 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.88■■□□□ 1.09
RB1P06400 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RB1P06400 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.88■■□□□ 1.09
RB1P06400 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RB1P06400 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.88■■□□□ 1.09
RB1P06400 TSPY15P-201ENST00000457163 923 ntBASIC21.88■■□□□ 1.09
RB1P06400 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.88■■□□□ 1.09
RB1P06400 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.88■■□□□ 1.09
RB1P06400 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RB1P06400 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.88■■□□□ 1.09
RB1P06400 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.88■■□□□ 1.09
RB1P06400 AC127496.7-201ENST00000625110 1798 ntBASIC21.88■■□□□ 1.09
RB1P06400 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.88■■□□□ 1.09
RB1P06400 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RB1P06400 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RB1P06400 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RB1P06400 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.87■■□□□ 1.09
RB1P06400 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RB1P06400 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RB1P06400 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RB1P06400 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.87■■□□□ 1.09
RB1P06400 AL355075.4-201ENST00000554988 638 ntBASIC21.87■■□□□ 1.09
RB1P06400 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RB1P06400 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.87■■□□□ 1.09
RB1P06400 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RB1P06400 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.86■■□□□ 1.09
RB1P06400 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RB1P06400 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.86■■□□□ 1.09
RB1P06400 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms