Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 AC245052.3-201ENST00000450182 901 ntBASIC18.69■□□□□ 0.58
HIST1H2ABP04908 AC010141.2-201ENST00000452426 721 ntBASIC18.69■□□□□ 0.58
HIST1H2ABP04908 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 AC104187.1-201ENST00000607510 612 ntBASIC18.69■□□□□ 0.58
HIST1H2ABP04908 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2ABP04908 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 AP001160.3-201ENST00000601484 763 ntBASIC18.68■□□□□ 0.58
HIST1H2ABP04908 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H2ABP04908 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 ZNRF2P3-201ENST00000424200 374 ntBASIC18.67■□□□□ 0.58
HIST1H2ABP04908 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 KRT18P14-201ENST00000534205 1250 ntBASIC18.67■□□□□ 0.58
HIST1H2ABP04908 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 CCDC92B-201ENST00000575506 885 ntBASIC18.67■□□□□ 0.58
HIST1H2ABP04908 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2ABP04908 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.66■□□□□ 0.58
HIST1H2ABP04908 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 AC011484.1-201ENST00000377652 1995 ntBASIC18.66■□□□□ 0.58
HIST1H2ABP04908 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2ABP04908 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms