Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 AC003102.1-202ENST00000563394 1796 ntBASIC19.2■□□□□ 0.66
PDGFAP04085 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
PDGFAP04085 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.2■□□□□ 0.66
PDGFAP04085 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.2■□□□□ 0.66
PDGFAP04085 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.2■□□□□ 0.66
PDGFAP04085 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.2■□□□□ 0.66
PDGFAP04085 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.2■□□□□ 0.66
PDGFAP04085 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 AL391422.3-201ENST00000603791 2761 ntBASIC19.2■□□□□ 0.66
PDGFAP04085 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PDGFAP04085 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 AC091799.1-201ENST00000422823 811 ntBASIC19.19■□□□□ 0.66
PDGFAP04085 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.19■□□□□ 0.66
PDGFAP04085 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PDGFAP04085 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.19■□□□□ 0.66
PDGFAP04085 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.19■□□□□ 0.66
PDGFAP04085 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PDGFAP04085 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDGFAP04085 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFAP04085 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
PDGFAP04085 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
PDGFAP04085 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PDGFAP04085 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDGFAP04085 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFAP04085 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.18■□□□□ 0.66
PDGFAP04085 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFAP04085 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
PDGFAP04085 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDGFAP04085 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.18■□□□□ 0.66
PDGFAP04085 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFAP04085 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFAP04085 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFAP04085 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDGFAP04085 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFAP04085 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDGFAP04085 UBE2SP1-201ENST00000450587 669 ntBASIC19.17■□□□□ 0.66
PDGFAP04085 AC060766.5-201ENST00000590539 871 ntBASIC19.17■□□□□ 0.66
PDGFAP04085 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 CYP2T3P-201ENST00000601990 817 ntBASIC19.17■□□□□ 0.66
PDGFAP04085 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFAP04085 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFAP04085 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFAP04085 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFAP04085 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.17■□□□□ 0.66
PDGFAP04085 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFAP04085 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.16■□□□□ 0.66
PDGFAP04085 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.16■□□□□ 0.66
PDGFAP04085 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PDGFAP04085 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.16■□□□□ 0.66
PDGFAP04085 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.16■□□□□ 0.66
PDGFAP04085 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFAP04085 FAM21FP-204ENST00000608637 956 ntBASIC19.16■□□□□ 0.66
PDGFAP04085 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PDGFAP04085 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDGFAP04085 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.16■□□□□ 0.66
PDGFAP04085 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDGFAP04085 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFAP04085 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms