Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFP01375 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFP01375 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TNFP01375 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFP01375 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFP01375 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFP01375 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFP01375 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFP01375 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TNFP01375 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFP01375 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFP01375 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFP01375 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFP01375 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFP01375 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFP01375 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFP01375 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFP01375 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TNFP01375 AC087633.2-202ENST00000565166 1439 ntBASIC20.14■□□□□ 0.81
TNFP01375 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFP01375 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFP01375 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFP01375 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFP01375 AC026366.1-201ENST00000488803 879 ntBASIC20.14■□□□□ 0.81
TNFP01375 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.14■□□□□ 0.81
TNFP01375 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFP01375 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFP01375 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFP01375 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFP01375 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.13■□□□□ 0.81
TNFP01375 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TNFP01375 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 EP400NL-214ENST00000641289 2402 ntBASIC20.13■□□□□ 0.81
TNFP01375 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TNFP01375 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.13■□□□□ 0.81
TNFP01375 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFP01375 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFP01375 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFP01375 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TNFP01375 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFP01375 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFP01375 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFP01375 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 AP003097.1-201ENST00000530657 1135 ntBASIC20.12■□□□□ 0.81
TNFP01375 AC008687.6-201ENST00000596318 630 ntBASIC20.12■□□□□ 0.81
TNFP01375 AC006058.3-201ENST00000606217 1069 ntBASIC20.12■□□□□ 0.81
TNFP01375 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFP01375 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TNFP01375 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TNFP01375 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFP01375 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
TNFP01375 Z98882.1-201ENST00000622160 2253 ntBASIC20.11■□□□□ 0.81
TNFP01375 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFP01375 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFP01375 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
TNFP01375 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFP01375 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFP01375 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TNFP01375 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
TNFP01375 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFP01375 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFP01375 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TNFP01375 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNFP01375 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFP01375 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFP01375 AC092368.3-202ENST00000574180 1591 ntBASIC20.11■□□□□ 0.81
TNFP01375 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFP01375 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TNFP01375 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFP01375 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFP01375 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFP01375 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFP01375 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFP01375 PRORSD1P-201ENST00000295112 541 ntBASIC20.1■□□□□ 0.81
TNFP01375 PNMA6B-201ENST00000538162 1200 ntBASIC20.1■□□□□ 0.81
TNFP01375 C2orf69P4-201ENST00000565394 541 ntBASIC20.1■□□□□ 0.81
TNFP01375 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFP01375 AC066615.1-201ENST00000640911 628 ntBASIC20.1■□□□□ 0.81
TNFP01375 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms