Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC080038.3-201ENST00000623346 1952 ntBASIC17.2■□□□□ 0.34
ABCA1O95477 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 FAM210CP-201ENST00000445714 574 ntBASIC17.2■□□□□ 0.34
ABCA1O95477 SNORA78-201ENST00000459373 127 ntBASIC17.2■□□□□ 0.34
ABCA1O95477 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.2■□□□□ 0.34
ABCA1O95477 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.2■□□□□ 0.34
ABCA1O95477 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ABCA1O95477 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ABCA1O95477 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ABCA1O95477 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.2■□□□□ 0.34
ABCA1O95477 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.2■□□□□ 0.34
ABCA1O95477 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCA1O95477 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ABCA1O95477 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ABCA1O95477 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.19■□□□□ 0.34
ABCA1O95477 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.19■□□□□ 0.34
ABCA1O95477 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ABCA1O95477 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.19■□□□□ 0.34
ABCA1O95477 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.19■□□□□ 0.34
ABCA1O95477 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.19■□□□□ 0.34
ABCA1O95477 AL589743.5-201ENST00000616611 1050 ntBASIC17.19■□□□□ 0.34
ABCA1O95477 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ABCA1O95477 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 AC003102.1-202ENST00000563394 1796 ntBASIC17.19■□□□□ 0.34
ABCA1O95477 GUSBP5-202ENST00000510805 1989 ntBASIC17.19■□□□□ 0.34
ABCA1O95477 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCA1O95477 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ABCA1O95477 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.18■□□□□ 0.34
ABCA1O95477 REXO1L12P-201ENST00000622156 912 ntBASIC17.18■□□□□ 0.34
ABCA1O95477 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCA1O95477 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ABCA1O95477 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ABCA1O95477 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCA1O95477 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ABCA1O95477 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCA1O95477 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ABCA1O95477 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.18■□□□□ 0.34
ABCA1O95477 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.18■□□□□ 0.34
ABCA1O95477 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCA1O95477 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.17■□□□□ 0.34
ABCA1O95477 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.17■□□□□ 0.34
ABCA1O95477 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.17■□□□□ 0.34
ABCA1O95477 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ABCA1O95477 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ABCA1O95477 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCA1O95477 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCA1O95477 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms