Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNSO60931 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CTNSO60931 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNSO60931 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.31■□□□□ 0.68
CTNSO60931 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNSO60931 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTNSO60931 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNSO60931 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNSO60931 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNSO60931 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.3■□□□□ 0.68
CTNSO60931 AC083906.2-201ENST00000511578 360 ntBASIC19.3■□□□□ 0.68
CTNSO60931 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.3■□□□□ 0.68
CTNSO60931 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.3■□□□□ 0.68
CTNSO60931 AL121832.2-201ENST00000610979 668 ntBASIC19.3■□□□□ 0.68
CTNSO60931 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNSO60931 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CTNSO60931 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNSO60931 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.3■□□□□ 0.68
CTNSO60931 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNSO60931 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CTNSO60931 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.29■□□□□ 0.68
CTNSO60931 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.29■□□□□ 0.68
CTNSO60931 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 AC105036.2-201ENST00000569468 176 ntBASIC19.29■□□□□ 0.68
CTNSO60931 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.29■□□□□ 0.68
CTNSO60931 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CTNSO60931 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNSO60931 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CTNSO60931 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTNSO60931 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTNSO60931 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.28■□□□□ 0.68
CTNSO60931 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.28■□□□□ 0.68
CTNSO60931 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNSO60931 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNSO60931 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNSO60931 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNSO60931 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNSO60931 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.28■□□□□ 0.68
CTNSO60931 AC027702.1-201ENST00000563810 1770 ntBASIC19.28■□□□□ 0.68
CTNSO60931 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNSO60931 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CTNSO60931 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNSO60931 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNSO60931 AC006128.1-201ENST00000624704 1661 ntBASIC19.27■□□□□ 0.68
CTNSO60931 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNSO60931 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNSO60931 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNSO60931 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNSO60931 GPX1P1-201ENST00000388829 606 ntBASIC19.27■□□□□ 0.68
CTNSO60931 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNSO60931 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNSO60931 AC093787.1-201ENST00000450396 207 ntBASIC19.27■□□□□ 0.68
CTNSO60931 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNSO60931 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.27■□□□□ 0.68
CTNSO60931 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNSO60931 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.27■□□□□ 0.68
CTNSO60931 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTNSO60931 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNSO60931 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNSO60931 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNSO60931 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNSO60931 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNSO60931 AC010980.2-201ENST00000587099 1412 ntBASIC19.26■□□□□ 0.67
CTNSO60931 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.26■□□□□ 0.67
CTNSO60931 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNSO60931 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNSO60931 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTNSO60931 MCRIP2P1-201ENST00000394346 511 ntBASIC19.26■□□□□ 0.67
CTNSO60931 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNSO60931 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.26■□□□□ 0.67
CTNSO60931 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CTNSO60931 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNSO60931 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNSO60931 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CTNSO60931 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTNSO60931 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.25■□□□□ 0.67
CTNSO60931 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
CTNSO60931 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CTNSO60931 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms