Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
ZIC3O60481 KRT18P68-201ENST00000392293 1000 ntBASIC18.57■□□□□ 0.56
ZIC3O60481 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZIC3O60481 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
ZIC3O60481 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.57■□□□□ 0.56
ZIC3O60481 AC098934.4-201ENST00000564127 592 ntBASIC18.57■□□□□ 0.56
ZIC3O60481 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.57■□□□□ 0.56
ZIC3O60481 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ZIC3O60481 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 KRT17P1-201ENST00000399211 1546 ntBASIC18.57■□□□□ 0.56
ZIC3O60481 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.57■□□□□ 0.56
ZIC3O60481 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.57■□□□□ 0.56
ZIC3O60481 PLK5-205ENST00000642079 1969 ntBASIC18.57■□□□□ 0.56
ZIC3O60481 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ZIC3O60481 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZIC3O60481 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZIC3O60481 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ZIC3O60481 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZIC3O60481 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.56■□□□□ 0.56
ZIC3O60481 AC069152.1-201ENST00000438030 544 ntBASIC18.56■□□□□ 0.56
ZIC3O60481 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.56■□□□□ 0.56
ZIC3O60481 AC092118.2-201ENST00000613495 667 ntBASIC18.56■□□□□ 0.56
ZIC3O60481 AC133041.1-202ENST00000642053 222 ntBASIC18.56■□□□□ 0.56
ZIC3O60481 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZIC3O60481 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.56■□□□□ 0.56
ZIC3O60481 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZIC3O60481 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZIC3O60481 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.56■□□□□ 0.56
ZIC3O60481 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.55■□□□□ 0.56
ZIC3O60481 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.55■□□□□ 0.56
ZIC3O60481 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.55■□□□□ 0.56
ZIC3O60481 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZIC3O60481 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.55■□□□□ 0.56
ZIC3O60481 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.55■□□□□ 0.56
ZIC3O60481 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.55■□□□□ 0.56
ZIC3O60481 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.55■□□□□ 0.56
ZIC3O60481 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZIC3O60481 AC027702.1-201ENST00000563810 1770 ntBASIC18.55■□□□□ 0.56
ZIC3O60481 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.54■□□□□ 0.56
ZIC3O60481 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 LSM12P1-201ENST00000411836 588 ntBASIC18.54■□□□□ 0.56
ZIC3O60481 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.54■□□□□ 0.56
ZIC3O60481 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.54■□□□□ 0.56
ZIC3O60481 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ZIC3O60481 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZIC3O60481 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.54■□□□□ 0.56
ZIC3O60481 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.53■□□□□ 0.56
ZIC3O60481 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZIC3O60481 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZIC3O60481 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.53■□□□□ 0.56
ZIC3O60481 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZIC3O60481 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZIC3O60481 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZIC3O60481 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.53■□□□□ 0.56
ZIC3O60481 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.53■□□□□ 0.56
ZIC3O60481 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.53■□□□□ 0.56
ZIC3O60481 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
ZIC3O60481 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ZIC3O60481 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
ZIC3O60481 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZIC3O60481 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ZIC3O60481 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.53■□□□□ 0.56
ZIC3O60481 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ZIC3O60481 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
ZIC3O60481 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
ZIC3O60481 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 AC087633.2-202ENST00000565166 1439 ntBASIC18.52■□□□□ 0.56
ZIC3O60481 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.52■□□□□ 0.56
ZIC3O60481 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms