Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.75■□□□□ 0.27
SSSCA1O60232 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.75■□□□□ 0.27
SSSCA1O60232 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSSCA1O60232 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SSSCA1O60232 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.74■□□□□ 0.27
SSSCA1O60232 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.74■□□□□ 0.27
SSSCA1O60232 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.74■□□□□ 0.27
SSSCA1O60232 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.74■□□□□ 0.27
SSSCA1O60232 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
SSSCA1O60232 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSSCA1O60232 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.74■□□□□ 0.27
SSSCA1O60232 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SSSCA1O60232 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.73■□□□□ 0.27
SSSCA1O60232 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSSCA1O60232 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSSCA1O60232 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSSCA1O60232 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
SSSCA1O60232 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSSCA1O60232 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSSCA1O60232 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
SSSCA1O60232 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SSSCA1O60232 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SSSCA1O60232 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SSSCA1O60232 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSSCA1O60232 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSSCA1O60232 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.71■□□□□ 0.27
SSSCA1O60232 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSSCA1O60232 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.71■□□□□ 0.27
SSSCA1O60232 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.71■□□□□ 0.27
SSSCA1O60232 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.71■□□□□ 0.27
SSSCA1O60232 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.71■□□□□ 0.27
SSSCA1O60232 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SSSCA1O60232 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.71■□□□□ 0.27
SSSCA1O60232 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSSCA1O60232 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SSSCA1O60232 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSSCA1O60232 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSSCA1O60232 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SSSCA1O60232 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms