Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KDELR3O43731 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.92■□□□□ 0.94
KDELR3O43731 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.92■□□□□ 0.94
KDELR3O43731 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 MIPEPP3-201ENST00000412105 444 ntBASIC20.92■□□□□ 0.94
KDELR3O43731 AL355472.2-201ENST00000422958 438 ntBASIC20.92■□□□□ 0.94
KDELR3O43731 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.92■□□□□ 0.94
KDELR3O43731 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.92■□□□□ 0.94
KDELR3O43731 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
KDELR3O43731 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
KDELR3O43731 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.92■□□□□ 0.94
KDELR3O43731 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.92■□□□□ 0.94
KDELR3O43731 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.92■□□□□ 0.94
KDELR3O43731 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
KDELR3O43731 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KDELR3O43731 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KDELR3O43731 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
KDELR3O43731 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.92■□□□□ 0.94
KDELR3O43731 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KDELR3O43731 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KDELR3O43731 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDELR3O43731 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDELR3O43731 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.91■□□□□ 0.94
KDELR3O43731 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.91■□□□□ 0.94
KDELR3O43731 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.91■□□□□ 0.94
KDELR3O43731 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDELR3O43731 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KDELR3O43731 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDELR3O43731 AL137060.1-201ENST00000618151 2648 ntBASIC20.91■□□□□ 0.94
KDELR3O43731 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.9■□□□□ 0.94
KDELR3O43731 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 AC006128.1-201ENST00000624704 1661 ntBASIC20.9■□□□□ 0.94
KDELR3O43731 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.9■□□□□ 0.94
KDELR3O43731 KRT18P68-201ENST00000392293 1000 ntBASIC20.9■□□□□ 0.94
KDELR3O43731 BX276092.2-201ENST00000417668 665 ntBASIC20.9■□□□□ 0.94
KDELR3O43731 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.9■□□□□ 0.94
KDELR3O43731 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.9■□□□□ 0.94
KDELR3O43731 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.9■□□□□ 0.94
KDELR3O43731 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.9■□□□□ 0.94
KDELR3O43731 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.9■□□□□ 0.94
KDELR3O43731 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.9■□□□□ 0.94
KDELR3O43731 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
KDELR3O43731 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDELR3O43731 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.9■□□□□ 0.94
KDELR3O43731 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDELR3O43731 AC087633.2-202ENST00000565166 1439 ntBASIC20.89■□□□□ 0.94
KDELR3O43731 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDELR3O43731 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.89■□□□□ 0.93
KDELR3O43731 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.89■□□□□ 0.93
KDELR3O43731 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDELR3O43731 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDELR3O43731 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.89■□□□□ 0.93
KDELR3O43731 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.89■□□□□ 0.93
KDELR3O43731 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KDELR3O43731 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.89■□□□□ 0.93
KDELR3O43731 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KDELR3O43731 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.88■□□□□ 0.93
KDELR3O43731 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.88■□□□□ 0.93
KDELR3O43731 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 AL138781.1-201ENST00000566567 1274 ntBASIC20.88■□□□□ 0.93
KDELR3O43731 AC142086.2-201ENST00000569753 217 ntBASIC20.88■□□□□ 0.93
KDELR3O43731 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.88■□□□□ 0.93
KDELR3O43731 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.88■□□□□ 0.93
KDELR3O43731 MIR2861-201ENST00000636310 90 ntBASIC20.88■□□□□ 0.93
KDELR3O43731 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.88■□□□□ 0.93
KDELR3O43731 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms