Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SRGAP3O43295 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.59■■□□□ 1.69
SRGAP3O43295 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.58■■□□□ 1.69
SRGAP3O43295 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SRGAP3O43295 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.58■■□□□ 1.69
SRGAP3O43295 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SRGAP3O43295 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SRGAP3O43295 SLC29A4P1-201ENST00000398760 971 ntBASIC25.58■■□□□ 1.69
SRGAP3O43295 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.58■■□□□ 1.69
SRGAP3O43295 AL355472.2-201ENST00000422958 438 ntBASIC25.58■■□□□ 1.69
SRGAP3O43295 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SRGAP3O43295 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25.58■■□□□ 1.69
SRGAP3O43295 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.58■■□□□ 1.69
SRGAP3O43295 AC100791.3-201ENST00000617619 330 ntBASIC25.58■■□□□ 1.69
SRGAP3O43295 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SRGAP3O43295 CYP21A1P-202ENST00000354927 1481 ntBASIC25.58■■□□□ 1.69
SRGAP3O43295 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.68
SRGAP3O43295 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SRGAP3O43295 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.57■■□□□ 1.68
SRGAP3O43295 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SRGAP3O43295 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SRGAP3O43295 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.57■■□□□ 1.68
SRGAP3O43295 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SRGAP3O43295 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.57■■□□□ 1.68
SRGAP3O43295 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SRGAP3O43295 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SRGAP3O43295 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SRGAP3O43295 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
SRGAP3O43295 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
SRGAP3O43295 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.56■■□□□ 1.68
SRGAP3O43295 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.56■■□□□ 1.68
SRGAP3O43295 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.56■■□□□ 1.68
SRGAP3O43295 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SRGAP3O43295 MIPEPP3-201ENST00000412105 444 ntBASIC25.56■■□□□ 1.68
SRGAP3O43295 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.56■■□□□ 1.68
SRGAP3O43295 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.56■■□□□ 1.68
SRGAP3O43295 AL138781.1-201ENST00000566567 1274 ntBASIC25.56■■□□□ 1.68
SRGAP3O43295 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SRGAP3O43295 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SRGAP3O43295 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.55■■□□□ 1.68
SRGAP3O43295 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 MCRIP2P1-201ENST00000394346 511 ntBASIC25.55■■□□□ 1.68
SRGAP3O43295 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.55■■□□□ 1.68
SRGAP3O43295 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.55■■□□□ 1.68
SRGAP3O43295 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.55■■□□□ 1.68
SRGAP3O43295 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
SRGAP3O43295 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SRGAP3O43295 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SRGAP3O43295 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
SRGAP3O43295 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SRGAP3O43295 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SRGAP3O43295 AC027702.1-201ENST00000563810 1770 ntBASIC25.54■■□□□ 1.68
SRGAP3O43295 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SRGAP3O43295 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SRGAP3O43295 AL355802.2-201ENST00000402069 882 ntBASIC25.54■■□□□ 1.68
SRGAP3O43295 BX276092.2-201ENST00000417668 665 ntBASIC25.54■■□□□ 1.68
SRGAP3O43295 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.54■■□□□ 1.68
SRGAP3O43295 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.54■■□□□ 1.68
SRGAP3O43295 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.54■■□□□ 1.68
SRGAP3O43295 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.54■■□□□ 1.68
SRGAP3O43295 CYP2T3P-201ENST00000601990 817 ntBASIC25.54■■□□□ 1.68
SRGAP3O43295 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.54■■□□□ 1.68
SRGAP3O43295 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.54■■□□□ 1.68
SRGAP3O43295 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRGAP3O43295 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.54■■□□□ 1.68
SRGAP3O43295 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.54■■□□□ 1.68
SRGAP3O43295 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.54■■□□□ 1.68
SRGAP3O43295 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRGAP3O43295 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SRGAP3O43295 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.53■■□□□ 1.68
SRGAP3O43295 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.53■■□□□ 1.68
SRGAP3O43295 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRGAP3O43295 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.53■■□□□ 1.68
SRGAP3O43295 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRGAP3O43295 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.53■■□□□ 1.68
SRGAP3O43295 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.53■■□□□ 1.68
SRGAP3O43295 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRGAP3O43295 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRGAP3O43295 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms