Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDN4O14493 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN4O14493 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN4O14493 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN4O14493 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN4O14493 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN4O14493 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN4O14493 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CLDN4O14493 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN4O14493 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CLDN4O14493 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN4O14493 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 AC007375.3-201ENST00000600936 2314 ntBASIC19.37■□□□□ 0.69
CLDN4O14493 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.37■□□□□ 0.69
CLDN4O14493 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDN4O14493 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.37■□□□□ 0.69
CLDN4O14493 AF201337.1-201ENST00000520239 748 ntBASIC19.37■□□□□ 0.69
CLDN4O14493 AC016405.3-201ENST00000607710 860 ntBASIC19.37■□□□□ 0.69
CLDN4O14493 AL121832.2-201ENST00000610979 668 ntBASIC19.37■□□□□ 0.69
CLDN4O14493 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN4O14493 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN4O14493 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN4O14493 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CLDN4O14493 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLDN4O14493 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 AL512625.2-201ENST00000417533 625 ntBASIC19.36■□□□□ 0.69
CLDN4O14493 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN4O14493 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN4O14493 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN4O14493 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN4O14493 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLDN4O14493 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN4O14493 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLDN4O14493 AC005229.4-201ENST00000610085 2198 ntBASIC19.35■□□□□ 0.69
CLDN4O14493 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN4O14493 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN4O14493 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN4O14493 AC083906.2-201ENST00000511578 360 ntBASIC19.35■□□□□ 0.69
CLDN4O14493 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN4O14493 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN4O14493 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN4O14493 AC105036.2-201ENST00000569468 176 ntBASIC19.35■□□□□ 0.69
CLDN4O14493 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN4O14493 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN4O14493 AC100791.3-201ENST00000617619 330 ntBASIC19.35■□□□□ 0.69
CLDN4O14493 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN4O14493 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN4O14493 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLDN4O14493 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CLDN4O14493 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN4O14493 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN4O14493 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 GPX1P1-201ENST00000388829 606 ntBASIC19.34■□□□□ 0.69
CLDN4O14493 NCF1B-203ENST00000435988 1254 ntBASIC19.34■□□□□ 0.69
CLDN4O14493 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN4O14493 AL050303.2-201ENST00000619798 666 ntBASIC19.34■□□□□ 0.69
CLDN4O14493 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLDN4O14493 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CLDN4O14493 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN4O14493 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN4O14493 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN4O14493 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLDN4O14493 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.33■□□□□ 0.69
CLDN4O14493 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN4O14493 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLDN4O14493 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN4O14493 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN4O14493 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.33■□□□□ 0.69
CLDN4O14493 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN4O14493 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CLDN4O14493 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN4O14493 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms