Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TERF1P5-201ENST00000477545 1207 ntBASIC18.25■□□□□ 0.51
NPIPB4C9JG80 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 RARRES2P6-201ENST00000567333 442 ntBASIC18.24■□□□□ 0.51
NPIPB4C9JG80 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 AL591742.1-201ENST00000604433 565 ntBASIC18.24■□□□□ 0.51
NPIPB4C9JG80 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 AC013268.1-206ENST00000638368 961 ntBASIC18.24■□□□□ 0.51
NPIPB4C9JG80 AC112229.1-201ENST00000639295 961 ntBASIC18.24■□□□□ 0.51
NPIPB4C9JG80 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.24■□□□□ 0.51
NPIPB4C9JG80 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 AC092720.2-201ENST00000602388 1665 ntBASIC18.23■□□□□ 0.51
NPIPB4C9JG80 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NPIPB4C9JG80 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 AL162377.1-201ENST00000618844 1793 ntBASIC18.22■□□□□ 0.51
NPIPB4C9JG80 AL121603.2-201ENST00000557373 2117 ntBASIC18.22■□□□□ 0.51
NPIPB4C9JG80 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 PGM5P4-201ENST00000421970 445 ntBASIC18.22■□□□□ 0.51
NPIPB4C9JG80 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 AC137761.2-201ENST00000561729 223 ntBASIC18.22■□□□□ 0.51
NPIPB4C9JG80 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 AC145350.3-201ENST00000569033 163 ntBASIC18.22■□□□□ 0.51
NPIPB4C9JG80 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 KRT8P36-201ENST00000489121 1440 ntBASIC18.22■□□□□ 0.51
NPIPB4C9JG80 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.22■□□□□ 0.51
NPIPB4C9JG80 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.21■□□□□ 0.51
NPIPB4C9JG80 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NPIPB4C9JG80 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPB4C9JG80 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms