Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 AC073210.2-201ENST00000430369 194 ntBASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 AL049796.1-201ENST00000565336 1766 ntBASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 BX276092.2-201ENST00000417668 665 ntBASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 AL355472.2-201ENST00000422958 438 ntBASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 AC069152.1-201ENST00000438030 544 ntBASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM200CA6NKL6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM200CA6NKL6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 AF106564.1-201ENST00000607058 2553 ntBASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 CYP2T3P-201ENST00000601990 817 ntBASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 AC092118.2-201ENST00000613495 667 ntBASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 TMEM191A-211ENST00000637163 1067 ntBASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TMEM200CA6NKL6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 KRT17P1-201ENST00000399211 1546 ntBASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 MIR4758-201ENST00000577688 71 ntBASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 AC133041.1-202ENST00000642053 222 ntBASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM200CA6NKL6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM200CA6NKL6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM200CA6NKL6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TMEM200CA6NKL6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM200CA6NKL6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM200CA6NKL6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms