Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01549A6NIU2 PCDHAC2-203ENST00000615316 3011 ntBASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01549A6NIU2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 OR2I1P-207ENST00000453522 948 ntBASIC14.59□□□□□ -0.07
LINC01549A6NIU2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 PVT1_1.1-201ENST00000615125 194 ntBASIC14.59□□□□□ -0.07
LINC01549A6NIU2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01549A6NIU2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01549A6NIU2 AC099778.1-201ENST00000568593 1911 ntBASIC14.58□□□□□ -0.07
LINC01549A6NIU2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01549A6NIU2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
LINC01549A6NIU2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01549A6NIU2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01549A6NIU2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 BX664725.1-201ENST00000438252 379 ntBASIC14.58□□□□□ -0.08
LINC01549A6NIU2 AL451085.2-201ENST00000605085 799 ntBASIC14.58□□□□□ -0.08
LINC01549A6NIU2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01549A6NIU2 AL512408.1-201ENST00000569378 2000 ntBASIC14.58□□□□□ -0.08
LINC01549A6NIU2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 AP006587.3-201ENST00000525742 1516 ntBASIC14.57□□□□□ -0.08
LINC01549A6NIU2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms