Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 NEFHP1-201ENST00000412845 2629 ntBASIC14.57□□□□□ -0.08
LINC01546A6NGU7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 AC103724.3-201ENST00000564481 992 ntBASIC14.56□□□□□ -0.08
LINC01546A6NGU7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01546A6NGU7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 AC055733.4-201ENST00000638462 1354 ntBASIC14.55□□□□□ -0.08
LINC01546A6NGU7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01546A6NGU7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 AC006455.2-201ENST00000429931 906 ntBASIC14.54□□□□□ -0.08
LINC01546A6NGU7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01546A6NGU7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 AC079598.2-202ENST00000546624 1451 ntBASIC14.53□□□□□ -0.08
LINC01546A6NGU7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 AC103834.1-201ENST00000520383 144 ntBASIC14.53□□□□□ -0.08
LINC01546A6NGU7 AC092028.1-203ENST00000608262 953 ntBASIC14.53□□□□□ -0.08
LINC01546A6NGU7 AL117332.1-201ENST00000622628 974 ntBASIC14.53□□□□□ -0.08
LINC01546A6NGU7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms