Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GMNCA6NCL1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.58■□□□□ 0.88
GMNCA6NCL1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GMNCA6NCL1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GMNCA6NCL1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 NEFHP1-201ENST00000412845 2629 ntBASIC20.57■□□□□ 0.88
GMNCA6NCL1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GMNCA6NCL1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GMNCA6NCL1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 AC010141.3-201ENST00000456659 717 ntBASIC20.56■□□□□ 0.88
GMNCA6NCL1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.56■□□□□ 0.88
GMNCA6NCL1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GMNCA6NCL1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.55■□□□□ 0.88
GMNCA6NCL1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GMNCA6NCL1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMNCA6NCL1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMNCA6NCL1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.54■□□□□ 0.88
GMNCA6NCL1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMNCA6NCL1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.53■□□□□ 0.88
GMNCA6NCL1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.53■□□□□ 0.88
GMNCA6NCL1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
GMNCA6NCL1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMNCA6NCL1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GMNCA6NCL1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMNCA6NCL1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMNCA6NCL1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GMNCA6NCL1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms