Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC097658.1-201ENST00000475555 843 ntBASIC30.64■■■□□ 2.49
HFM1A2PYH4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.63■■■□□ 2.49
HFM1A2PYH4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HFM1A2PYH4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
HFM1A2PYH4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC30.63■■■□□ 2.49
HFM1A2PYH4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
HFM1A2PYH4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HFM1A2PYH4 NME6-213ENST00000451657 871 ntTSL 2 BASIC30.63■■■□□ 2.49
HFM1A2PYH4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.63■■■□□ 2.49
HFM1A2PYH4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HFM1A2PYH4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HFM1A2PYH4 AL356652.1-201ENST00000615962 565 ntBASIC30.63■■■□□ 2.49
HFM1A2PYH4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
HFM1A2PYH4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
HFM1A2PYH4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
HFM1A2PYH4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
HFM1A2PYH4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
HFM1A2PYH4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC30.62■■■□□ 2.49
HFM1A2PYH4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.62■■■□□ 2.49
HFM1A2PYH4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
HFM1A2PYH4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
HFM1A2PYH4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HFM1A2PYH4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
HFM1A2PYH4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HFM1A2PYH4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC30.61■■■□□ 2.49
HFM1A2PYH4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
HFM1A2PYH4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
HFM1A2PYH4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.61■■■□□ 2.49
HFM1A2PYH4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
HFM1A2PYH4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC30.6■■■□□ 2.49
HFM1A2PYH4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC30.6■■■□□ 2.49
HFM1A2PYH4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
HFM1A2PYH4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
HFM1A2PYH4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
HFM1A2PYH4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
HFM1A2PYH4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
HFM1A2PYH4 PGM5P4-201ENST00000421970 445 ntBASIC30.59■■■□□ 2.49
HFM1A2PYH4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC30.59■■■□□ 2.49
HFM1A2PYH4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
HFM1A2PYH4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
HFM1A2PYH4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HFM1A2PYH4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HFM1A2PYH4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 MIR2861-201ENST00000636310 90 ntBASIC30.58■■■□□ 2.49
HFM1A2PYH4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
HFM1A2PYH4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
HFM1A2PYH4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 TSPY20P-201ENST00000450910 630 ntBASIC30.57■■■□□ 2.48
HFM1A2PYH4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
HFM1A2PYH4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
HFM1A2PYH4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 RNA5SP413-201ENST00000516373 109 ntBASIC30.56■■■□□ 2.48
HFM1A2PYH4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HFM1A2PYH4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC30.56■■■□□ 2.48
HFM1A2PYH4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC30.55■■■□□ 2.48
HFM1A2PYH4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
HFM1A2PYH4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
HFM1A2PYH4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
HFM1A2PYH4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms