Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 AL390719.1-204ENST00000412397 1219 ntBASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC163A0A0D9SF12 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC163A0A0D9SF12 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 AC010542.4-201ENST00000563151 1910 ntBASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 RCN1P1-201ENST00000400413 996 ntBASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 AL355075.4-201ENST00000554988 638 ntBASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 AC026471.6-201ENST00000622954 1905 ntBASIC20.49■□□□□ 0.87
CCDC163A0A0D9SF12 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 TSPY15P-201ENST00000457163 923 ntBASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC163A0A0D9SF12 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 CD177P1-201ENST00000606252 935 ntBASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 AC006557.6-201ENST00000623071 864 ntBASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC163A0A0D9SF12 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC163A0A0D9SF12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 AC127496.7-201ENST00000625110 1798 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms