Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 AC011484.1-201ENST00000377652 1995 ntBASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV30A0A087WSZ9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 AC061975.6-201ENST00000579045 1553 ntBASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV30A0A087WSZ9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 AC007225.1-201ENST00000566331 1836 ntBASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 AC138907.5-202ENST00000569484 235 ntBASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 KRT16P2-201ENST00000414673 1423 ntBASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV30A0A087WSZ9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 AL157384.1-201ENST00000445995 2473 ntBASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 LINC01006-201ENST00000333319 2292 ntBASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 AC027612.3-201ENST00000413684 1047 ntBASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 AC245052.3-201ENST00000450182 901 ntBASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 AC005837.3-201ENST00000612163 286 ntBASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV30A0A087WSZ9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV30A0A087WSZ9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV30A0A087WSZ9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV30A0A087WSZ9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV30A0A087WSZ9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms