Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 SLC47A1P1-202ENST00000449666 945 ntBASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV18A0A075B6X5 SMG8-203ENST00000578922 2178 ntBASIC17.64■□□□□ 0.42
TRAV18A0A075B6X5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.64■□□□□ 0.42
TRAV18A0A075B6X5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV18A0A075B6X5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRAV18A0A075B6X5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 RARRES2P1-201ENST00000474487 481 ntBASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV18A0A075B6X5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 SMUG1P1-201ENST00000590640 811 ntBASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV18A0A075B6X5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 SERBP1P1-201ENST00000396021 1160 ntBASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 MIR3621-201ENST00000580529 85 ntBASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 SYT6-210ENST00000641643 1587 ntBASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV18A0A075B6X5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 AL020996.1-203ENST00000536896 2307 ntBASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms