Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 LINC01718-201ENST00000441660 391 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 RAB5CP2-201ENST00000505368 637 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AC064862.6-201ENST00000511350 459 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AC009927.2-201ENST00000520812 481 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AP005265.1-201ENST00000584914 872 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AC107294.2-201ENST00000610001 701 ntTSL 3 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 OR4Q2-202ENST00000622436 921 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 SPRY4-IT1-201ENST00000630558 703 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 PDCL-201ENST00000259467 2813 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AL596275.2-201ENST00000641749 1706 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AC122688.4-201ENST00000623279 4394 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 SP100-202ENST00000340126 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 LINC02287-201ENST00000555299 1384 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
NPIPA3F8WFD2 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC8.59□□□□□ -1.04
NPIPA3F8WFD2 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 FRG2C-201ENST00000308062 2078 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 TRAPPC2-201ENST00000359680 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 CHST4-201ENST00000338482 2412 ntAPPRIS P1 TSL 4 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 HSD17B7-201ENST00000254521 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 OR14K1-201ENST00000283225 945 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 SNORA74B-201ENST00000391100 201 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC092035.1-201ENST00000418538 390 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC008060.3-201ENST00000419225 534 ntTSL 4 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 OR8B1P-201ENST00000419328 918 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 GAPDHP64-201ENST00000419696 1003 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 RPL29P28-201ENST00000421928 472 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AL450384.2-201ENST00000425669 1028 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC074121.1-201ENST00000441836 348 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 TSSK1A-201ENST00000450724 768 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC009945.1-201ENST00000453188 298 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 IGHV3-50-201ENST00000522107 317 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 OR8B10P-201ENST00000529692 932 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 ITFG2-AS1-203ENST00000547794 442 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC009432.1-201ENST00000560391 648 ntTSL 3 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC009414.2-201ENST00000565283 366 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 WBP11P1-202ENST00000567636 2972 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC027688.1-201ENST00000568471 584 ntTSL 4 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 ZNF426-203ENST00000589289 919 ntTSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 B4GALNT2-203ENST00000504681 1819 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 EEF1A1P19-201ENST00000513637 1382 ntBASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms