Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL161447.1-201ENST00000427811 230 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 BX276092.7-201ENST00000433410 623 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 GAPDHP68-201ENST00000434621 1008 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 RPL18AP2-201ENST00000450007 482 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AL606490.6-201ENST00000453735 523 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 RN7SL507P-201ENST00000474076 296 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC105460.1-201ENST00000509399 830 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC006499.7-201ENST00000512421 1117 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC011726.2-201ENST00000522547 508 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 TRIQK-220ENST00000524037 865 ntTSL 2 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC010319.1-201ENST00000526892 1258 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AL354919.2-201ENST00000527035 537 ntTSL 4 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC090607.3-201ENST00000559954 388 ntTSL 2 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC009414.2-201ENST00000565283 366 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AL035071.1-201ENST00000569087 2131 ntBASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC010761.2-201ENST00000584779 442 ntTSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 ZNF350-AS1-201ENST00000595010 698 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 CLEC4M-206ENST00000595496 792 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 PRB4-204ENST00000621732 709 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 EYA1-207ENST00000419131 1723 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LMO3Q8TAP4 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 CAVIN4-201ENST00000307584 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 NPIPB10P-201ENST00000424293 1354 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 GDNF-AS1-204ENST00000637595 1886 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 MIR503-201ENST00000385270 71 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 CALM2-202ENST00000409563 770 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 LINC01105-202ENST00000431182 708 ntTSL 4 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 LINC00307-201ENST00000451410 424 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 TAF8-205ENST00000465926 1222 ntTSL 2 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 RN7SL716P-201ENST00000580539 268 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 DYNLL1P3-201ENST00000596113 266 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 AC010978.1-206ENST00000598281 828 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 Z98884.2-201ENST00000602406 393 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 AC104958.2-201ENST00000605955 1141 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 CU633904.1-204ENST00000624907 777 ntTSL 3 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 SRP9-205ENST00000626563 329 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 ABBA01040607.1-201ENST00000640749 321 ntBASIC9.89□□□□□ -0.83
LMO3Q8TAP4 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LMO3Q8TAP4 AL391988.1-201ENST00000614747 1553 ntBASIC9.88□□□□□ -0.83
LMO3Q8TAP4 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LMO3Q8TAP4 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LMO3Q8TAP4 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms