Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC8.61□□□□□ -1.03
P04436 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC8.61□□□□□ -1.03
P04436 OR4Q2-202ENST00000622436 921 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
P04436 AC132825.5-201ENST00000640603 310 ntBASIC8.61□□□□□ -1.03
P04436 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC8.61□□□□□ -1.03
P04436 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 EOMES-203ENST00000461503 2080 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 SALRNA2-201ENST00000629082 2066 ntBASIC8.61□□□□□ -1.03
P04436 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 ANXA7-202ENST00000372921 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
P04436 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.03
P04436 DACH2-202ENST00000373131 2418 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
P04436 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC8.61□□□□□ -1.03
P04436 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 FCRLA-210ENST00000367959 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 AL356235.1-201ENST00000602791 2363 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 AC091962.1-201ENST00000561496 1765 ntBASIC8.61□□□□□ -1.03
P04436 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC8.61□□□□□ -1.03
P04436 HMGCLL1-205ENST00000398661 2532 ntTSL 2 BASIC8.6□□□□□ -1.03
P04436 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC8.6□□□□□ -1.03
P04436 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 LINC02011-201ENST00000566553 3830 ntTSL 2 BASIC8.6□□□□□ -1.03
P04436 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 CCDC65-201ENST00000266984 2084 ntTSL 5 BASIC8.6□□□□□ -1.03
P04436 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 KARS-202ENST00000319410 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 PKMP2-201ENST00000412159 1677 ntBASIC8.6□□□□□ -1.03
P04436 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
P04436 HSD17B7-201ENST00000254521 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 TEX35-201ENST00000319416 1023 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 RNA5SP349-201ENST00000363743 109 ntBASIC8.6□□□□□ -1.03
P04436 RNA5SP29-201ENST00000410988 106 ntBASIC8.6□□□□□ -1.03
P04436 ZFY-AS1-201ENST00000417305 500 ntTSL 2 BASIC8.6□□□□□ -1.03
P04436 ZNF70P1-201ENST00000417480 624 ntBASIC8.6□□□□□ -1.03
P04436 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC8.6□□□□□ -1.03
P04436 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 ACTG1P24-201ENST00000423783 877 ntBASIC8.6□□□□□ -1.03
P04436 RPSAP33-201ENST00000432315 865 ntBASIC8.6□□□□□ -1.03
P04436 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 AL009172.1-201ENST00000436365 1098 ntBASIC8.6□□□□□ -1.03
P04436 RPSAP17-201ENST00000437336 883 ntBASIC8.6□□□□□ -1.03
P04436 AL031674.1-203ENST00000448013 538 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 NDUFA5P3-201ENST00000449348 345 ntBASIC8.6□□□□□ -1.03
P04436 AL109809.2-201ENST00000455216 493 ntBASIC8.6□□□□□ -1.03
P04436 RN7SL291P-201ENST00000487916 289 ntBASIC8.6□□□□□ -1.03
P04436 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 IGHV3-50-201ENST00000522107 317 ntBASIC8.6□□□□□ -1.03
P04436 TMEM185AP1-201ENST00000524311 546 ntBASIC8.6□□□□□ -1.03
P04436 AC079789.1-201ENST00000561655 885 ntBASIC8.6□□□□□ -1.03
P04436 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
P04436 AC027277.2-201ENST00000566325 435 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 RN7SL378P-201ENST00000582657 298 ntBASIC8.6□□□□□ -1.03
P04436 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 AC004080.4-201ENST00000602610 633 ntBASIC8.6□□□□□ -1.03
P04436 AC079766.1-201ENST00000608774 427 ntBASIC8.6□□□□□ -1.03
P04436 AL354809.1-202ENST00000614005 640 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 AC138894.4-201ENST00000616703 256 ntBASIC8.6□□□□□ -1.03
P04436 LARS-216ENST00000618084 720 ntTSL 5 BASIC8.6□□□□□ -1.03
P04436 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC8.6□□□□□ -1.03
P04436 AL391987.5-201ENST00000618472 412 ntBASIC8.6□□□□□ -1.03
P04436 AC024257.4-201ENST00000618746 458 ntBASIC8.6□□□□□ -1.03
P04436 PRB4-204ENST00000621732 709 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
P04436 AC108125.1-201ENST00000622310 543 ntBASIC8.6□□□□□ -1.03
P04436 LINC01206-231ENST00000629026 858 ntTSL 5 BASIC8.6□□□□□ -1.03
P04436 AL132655.3-201ENST00000603095 1619 ntTSL 2 BASIC8.6□□□□□ -1.03
P04436 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.6□□□□□ -1.03
P04436 ANKRD1-201ENST00000371697 1979 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 GPD2-213ENST00000540309 1961 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.6□□□□□ -1.03
P04436 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
P04436 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
P04436 PRUNE1-203ENST00000368935 2238 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P04436 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC8.59□□□□□ -1.03
P04436 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.59□□□□□ -1.03
P04436 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P04436 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
P04436 RGS6-207ENST00000434263 1828 ntTSL 5 BASIC8.59□□□□□ -1.03
P04436 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC8.59□□□□□ -1.03
P04436 CDH8-211ENST00000584337 3986 ntTSL 5 BASIC8.59□□□□□ -1.03
P04436 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms