Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.26■□□□□ 0.83
COPG1Q9Y678 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.26■□□□□ 0.83
COPG1Q9Y678 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
COPG1Q9Y678 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COPG1Q9Y678 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.26■□□□□ 0.83
COPG1Q9Y678 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 AL391422.3-201ENST00000603791 2761 ntBASIC20.26■□□□□ 0.83
COPG1Q9Y678 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 TERF1P2-201ENST00000583350 1212 ntBASIC20.25■□□□□ 0.83
COPG1Q9Y678 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPG1Q9Y678 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.25■□□□□ 0.83
COPG1Q9Y678 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.24■□□□□ 0.83
COPG1Q9Y678 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPG1Q9Y678 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.23■□□□□ 0.83
COPG1Q9Y678 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPG1Q9Y678 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPG1Q9Y678 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPG1Q9Y678 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COPG1Q9Y678 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.23■□□□□ 0.83
COPG1Q9Y678 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.23■□□□□ 0.83
COPG1Q9Y678 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.23■□□□□ 0.83
COPG1Q9Y678 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPG1Q9Y678 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.23■□□□□ 0.83
COPG1Q9Y678 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPG1Q9Y678 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPG1Q9Y678 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPG1Q9Y678 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPG1Q9Y678 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COPG1Q9Y678 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 AC027702.1-201ENST00000563810 1770 ntBASIC20.21■□□□□ 0.83
COPG1Q9Y678 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COPG1Q9Y678 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COPG1Q9Y678 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.21■□□□□ 0.83
COPG1Q9Y678 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 PCDHAC2-203ENST00000615316 3011 ntBASIC20.21■□□□□ 0.83
COPG1Q9Y678 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.21■□□□□ 0.83
COPG1Q9Y678 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPG1Q9Y678 AC007952.6-201ENST00000573168 2673 ntBASIC20.2■□□□□ 0.82
COPG1Q9Y678 AC003957.1-201ENST00000625108 2673 ntBASIC20.2■□□□□ 0.82
COPG1Q9Y678 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms