Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GPC6Q9Y625 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.42■□□□□ 0.7
GPC6Q9Y625 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GPC6Q9Y625 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC6Q9Y625 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC6Q9Y625 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC6Q9Y625 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 AC006128.1-201ENST00000624704 1661 ntBASIC19.41■□□□□ 0.7
GPC6Q9Y625 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GPC6Q9Y625 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
GPC6Q9Y625 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC6Q9Y625 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GPC6Q9Y625 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC6Q9Y625 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 AC123595.1-201ENST00000440769 1046 ntBASIC19.4■□□□□ 0.7
GPC6Q9Y625 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 TPRG1LP1-201ENST00000598702 760 ntBASIC19.4■□□□□ 0.7
GPC6Q9Y625 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 FEM1AP1-201ENST00000431297 1995 ntBASIC19.4■□□□□ 0.7
GPC6Q9Y625 PLK5-205ENST00000642079 1969 ntBASIC19.4■□□□□ 0.7
GPC6Q9Y625 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC6Q9Y625 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC6Q9Y625 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC6Q9Y625 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC6Q9Y625 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GPC6Q9Y625 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC6Q9Y625 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
GPC6Q9Y625 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC6Q9Y625 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
GPC6Q9Y625 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GPC6Q9Y625 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.39■□□□□ 0.7
GPC6Q9Y625 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
GPC6Q9Y625 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 YBX1P1-201ENST00000445822 960 ntBASIC19.39■□□□□ 0.69
GPC6Q9Y625 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.39■□□□□ 0.69
GPC6Q9Y625 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC6Q9Y625 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 LINC02228-203ENST00000641970 1355 ntBASIC19.38■□□□□ 0.69
GPC6Q9Y625 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
GPC6Q9Y625 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC6Q9Y625 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
GPC6Q9Y625 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC6Q9Y625 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GPC6Q9Y625 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC6Q9Y625 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC6Q9Y625 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC6Q9Y625 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.37■□□□□ 0.69
GPC6Q9Y625 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms