Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 AC069152.1-201ENST00000438030 544 ntBASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 AC053503.5-201ENST00000601508 636 ntBASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 MYCNOS-205ENST00000641950 531 ntBASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 PKD1P6-201ENST00000343738 4769 ntBASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA4Q9Y5G9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA4Q9Y5G9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 AC244015.2-201ENST00000616358 1861 ntBASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA4Q9Y5G9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 AP001160.3-201ENST00000601484 763 ntBASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 AC133041.1-202ENST00000642053 222 ntBASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA4Q9Y5G9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms