Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB1Q9Y5F3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB1Q9Y5F3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 AC008687.6-201ENST00000596318 630 ntBASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB1Q9Y5F3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 AC093827.2-201ENST00000512654 315 ntBASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 AC133552.2-202ENST00000575694 574 ntBASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 AC010536.3-201ENST00000620306 533 ntBASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB1Q9Y5F3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB1Q9Y5F3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB1Q9Y5F3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB1Q9Y5F3 AC073210.2-201ENST00000430369 194 ntBASIC20.58■□□□□ 0.89
PCDHB1Q9Y5F3 AC245052.3-201ENST00000450182 901 ntBASIC20.58■□□□□ 0.89
PCDHB1Q9Y5F3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDHB1Q9Y5F3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB1Q9Y5F3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHB1Q9Y5F3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHB1Q9Y5F3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHB1Q9Y5F3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB1Q9Y5F3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 AC121338.2-201ENST00000622535 1744 ntBASIC20.56■□□□□ 0.88
PCDHB1Q9Y5F3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms