Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
SATB2Q9UPW6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 RBM17P2-201ENST00000616397 1405 ntBASIC20.13■□□□□ 0.81
SATB2Q9UPW6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 AC142381.4-202ENST00000563973 229 ntBASIC20.13■□□□□ 0.81
SATB2Q9UPW6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SATB2Q9UPW6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 AC128676.1-201ENST00000454392 318 ntBASIC20.12■□□□□ 0.81
SATB2Q9UPW6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 AL162412.1-201ENST00000567129 965 ntBASIC20.12■□□□□ 0.81
SATB2Q9UPW6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.12■□□□□ 0.81
SATB2Q9UPW6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 KRT16P2-201ENST00000414673 1423 ntBASIC20.11■□□□□ 0.81
SATB2Q9UPW6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.11■□□□□ 0.81
SATB2Q9UPW6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.11■□□□□ 0.81
SATB2Q9UPW6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SATB2Q9UPW6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SATB2Q9UPW6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.09■□□□□ 0.81
SATB2Q9UPW6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms