Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNIH4Q9P003 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNIH4Q9P003 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 AC010536.3-201ENST00000620306 533 ntBASIC19.26■□□□□ 0.67
CNIH4Q9P003 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNIH4Q9P003 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.26■□□□□ 0.67
CNIH4Q9P003 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNIH4Q9P003 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNIH4Q9P003 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNIH4Q9P003 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 DUX4L16-201ENST00000555130 1264 ntBASIC19.25■□□□□ 0.67
CNIH4Q9P003 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 RAP2CP1-201ENST00000605103 478 ntBASIC19.25■□□□□ 0.67
CNIH4Q9P003 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNIH4Q9P003 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNIH4Q9P003 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.24■□□□□ 0.67
CNIH4Q9P003 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNIH4Q9P003 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.24■□□□□ 0.67
CNIH4Q9P003 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.24■□□□□ 0.67
CNIH4Q9P003 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.24■□□□□ 0.67
CNIH4Q9P003 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.24■□□□□ 0.67
CNIH4Q9P003 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH4Q9P003 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 AC007322.1-201ENST00000426983 750 ntBASIC19.23■□□□□ 0.67
CNIH4Q9P003 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.23■□□□□ 0.67
CNIH4Q9P003 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 AC061975.6-201ENST00000579045 1553 ntBASIC19.23■□□□□ 0.67
CNIH4Q9P003 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH4Q9P003 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH4Q9P003 TERF1P5-201ENST00000477545 1207 ntBASIC19.22■□□□□ 0.67
CNIH4Q9P003 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH4Q9P003 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 AC013268.1-206ENST00000638368 961 ntBASIC19.22■□□□□ 0.67
CNIH4Q9P003 AC112229.1-201ENST00000639295 961 ntBASIC19.22■□□□□ 0.67
CNIH4Q9P003 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CNIH4Q9P003 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH4Q9P003 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH4Q9P003 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms