Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 AC007225.1-201ENST00000566331 1836 ntBASIC19.35■□□□□ 0.69
ZCCHC3Q9NUD5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZCCHC3Q9NUD5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZCCHC3Q9NUD5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.33■□□□□ 0.69
ZCCHC3Q9NUD5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ZCCHC3Q9NUD5 FP700111.2-201ENST00000619190 1892 ntBASIC19.33■□□□□ 0.69
ZCCHC3Q9NUD5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZCCHC3Q9NUD5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 KRT19P1-201ENST00000405746 1186 ntBASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZCCHC3Q9NUD5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 AC073314.1-201ENST00000568729 2216 ntBASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.32■□□□□ 0.68
ZCCHC3Q9NUD5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 KRT18P61-201ENST00000585825 1298 ntBASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 AC092667.1-201ENST00000434301 2586 ntBASIC19.31■□□□□ 0.68
ZCCHC3Q9NUD5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 AP005212.1-201ENST00000581547 1997 ntBASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms