Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-2Q9C056 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 THA1P-201ENST00000590384 1145 ntBASIC16.65■□□□□ 0.26
NKX6-2Q9C056 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 AC006128.1-201ENST00000624704 1661 ntBASIC16.65■□□□□ 0.26
NKX6-2Q9C056 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-2Q9C056 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NKX6-2Q9C056 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NKX6-2Q9C056 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 AC027702.1-201ENST00000563810 1770 ntBASIC16.64■□□□□ 0.25
NKX6-2Q9C056 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 MIR4281-201ENST00000580852 62 ntBASIC16.64■□□□□ 0.25
NKX6-2Q9C056 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX6-2Q9C056 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 AC139795.1-202ENST00000500444 432 ntBASIC16.63■□□□□ 0.25
NKX6-2Q9C056 DUX4L4-201ENST00000566884 1269 ntBASIC16.63■□□□□ 0.25
NKX6-2Q9C056 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 MIR4449-201ENST00000578365 66 ntBASIC16.63■□□□□ 0.25
NKX6-2Q9C056 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms