Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXP3Q9BZS1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 AC055733.4-201ENST00000638462 1354 ntBASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXP3Q9BZS1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXP3Q9BZS1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXP3Q9BZS1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
FOXP3Q9BZS1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 AL162377.1-201ENST00000618844 1793 ntBASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXP3Q9BZS1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms