Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 AC091799.1-201ENST00000422823 811 ntBASIC18.75■□□□□ 0.59
SPENQ96T58 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SPENQ96T58 KRT17P3-201ENST00000420566 1262 ntBASIC18.75■□□□□ 0.59
SPENQ96T58 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.75■□□□□ 0.59
SPENQ96T58 AC124016.1-201ENST00000609552 612 ntBASIC18.75■□□□□ 0.59
SPENQ96T58 REXO1L12P-201ENST00000622156 912 ntBASIC18.75■□□□□ 0.59
SPENQ96T58 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SPENQ96T58 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.75■□□□□ 0.59
SPENQ96T58 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SPENQ96T58 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPENQ96T58 AC087499.1-201ENST00000418141 1075 ntBASIC18.75■□□□□ 0.59
SPENQ96T58 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.74■□□□□ 0.59
SPENQ96T58 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.74■□□□□ 0.59
SPENQ96T58 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SPENQ96T58 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.74■□□□□ 0.59
SPENQ96T58 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.74■□□□□ 0.59
SPENQ96T58 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.74■□□□□ 0.59
SPENQ96T58 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SPENQ96T58 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SPENQ96T58 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SPENQ96T58 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SPENQ96T58 AC124283.5-201ENST00000624661 1809 ntBASIC18.74■□□□□ 0.59
SPENQ96T58 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPENQ96T58 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.74■□□□□ 0.59
SPENQ96T58 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.73■□□□□ 0.59
SPENQ96T58 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.73■□□□□ 0.59
SPENQ96T58 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.73■□□□□ 0.59
SPENQ96T58 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 KRT18P35-201ENST00000510488 1269 ntBASIC18.73■□□□□ 0.59
SPENQ96T58 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.73■□□□□ 0.59
SPENQ96T58 AC133561.5-201ENST00000635547 218 ntBASIC18.73■□□□□ 0.59
SPENQ96T58 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.73■□□□□ 0.59
SPENQ96T58 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.73■□□□□ 0.59
SPENQ96T58 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.73■□□□□ 0.59
SPENQ96T58 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SPENQ96T58 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SPENQ96T58 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SPENQ96T58 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPENQ96T58 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPENQ96T58 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SPENQ96T58 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.72■□□□□ 0.59
SPENQ96T58 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPENQ96T58 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.72■□□□□ 0.59
SPENQ96T58 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPENQ96T58 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SPENQ96T58 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SPENQ96T58 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.72■□□□□ 0.59
SPENQ96T58 FAM99A-202ENST00000538190 1989 ntBASIC18.72■□□□□ 0.59
SPENQ96T58 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPENQ96T58 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.72■□□□□ 0.59
SPENQ96T58 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.72■□□□□ 0.59
SPENQ96T58 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.72■□□□□ 0.59
SPENQ96T58 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPENQ96T58 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SPENQ96T58 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPENQ96T58 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPENQ96T58 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SPENQ96T58 CD177P1-201ENST00000606252 935 ntBASIC18.71■□□□□ 0.59
SPENQ96T58 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.71■□□□□ 0.59
SPENQ96T58 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPENQ96T58 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPENQ96T58 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPENQ96T58 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms