Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 AC007225.1-201ENST00000566331 1836 ntBASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A4EQ96PG1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 KRT18P5-201ENST00000436075 1291 ntBASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A4EQ96PG1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 AC091799.1-201ENST00000422823 811 ntBASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 AL157384.1-201ENST00000445995 2473 ntBASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A4EQ96PG1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 KRT18P11-201ENST00000435214 1283 ntBASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 FP700111.2-201ENST00000619190 1892 ntBASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A4EQ96PG1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 AC137761.2-201ENST00000561729 223 ntBASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 AC145350.3-201ENST00000569033 163 ntBASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 LINC01521-201ENST00000504184 1943 ntBASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MS4A4EQ96PG1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms