Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SHDQ96IW2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.98■□□□□ 0.95
SHDQ96IW2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SHDQ96IW2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
SHDQ96IW2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.98■□□□□ 0.95
SHDQ96IW2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.98■□□□□ 0.95
SHDQ96IW2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.98■□□□□ 0.95
SHDQ96IW2 AC012306.2-201ENST00000609350 630 ntBASIC20.98■□□□□ 0.95
SHDQ96IW2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.98■□□□□ 0.95
SHDQ96IW2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SHDQ96IW2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SHDQ96IW2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SHDQ96IW2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.97■□□□□ 0.95
SHDQ96IW2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.97■□□□□ 0.95
SHDQ96IW2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SHDQ96IW2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.97■□□□□ 0.95
SHDQ96IW2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHDQ96IW2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHDQ96IW2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHDQ96IW2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SHDQ96IW2 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.96■□□□□ 0.95
SHDQ96IW2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.96■□□□□ 0.95
SHDQ96IW2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHDQ96IW2 RCN1P1-201ENST00000400413 996 ntBASIC20.96■□□□□ 0.95
SHDQ96IW2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.96■□□□□ 0.95
SHDQ96IW2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SHDQ96IW2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHDQ96IW2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHDQ96IW2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHDQ96IW2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHDQ96IW2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.95■□□□□ 0.94
SHDQ96IW2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SHDQ96IW2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.95■□□□□ 0.94
SHDQ96IW2 AL355075.4-201ENST00000554988 638 ntBASIC20.95■□□□□ 0.94
SHDQ96IW2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.95■□□□□ 0.94
SHDQ96IW2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHDQ96IW2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SHDQ96IW2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHDQ96IW2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SHDQ96IW2 TSPY15P-201ENST00000457163 923 ntBASIC20.94■□□□□ 0.94
SHDQ96IW2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.94■□□□□ 0.94
SHDQ96IW2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.94■□□□□ 0.94
SHDQ96IW2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHDQ96IW2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SHDQ96IW2 CD177P1-201ENST00000606252 935 ntBASIC20.94■□□□□ 0.94
SHDQ96IW2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.94■□□□□ 0.94
SHDQ96IW2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.94■□□□□ 0.94
SHDQ96IW2 AC087633.2-202ENST00000565166 1439 ntBASIC20.94■□□□□ 0.94
SHDQ96IW2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHDQ96IW2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.94■□□□□ 0.94
SHDQ96IW2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHDQ96IW2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHDQ96IW2 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.93■□□□□ 0.94
SHDQ96IW2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SHDQ96IW2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.93■□□□□ 0.94
SHDQ96IW2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.93■□□□□ 0.94
SHDQ96IW2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SHDQ96IW2 AC006557.6-201ENST00000623071 864 ntBASIC20.93■□□□□ 0.94
SHDQ96IW2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms