Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 AP005212.1-201ENST00000581547 1997 ntBASIC20.08■□□□□ 0.8
RHBDF1Q96CC6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RHBDF1Q96CC6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.08■□□□□ 0.8
RHBDF1Q96CC6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RHBDF1Q96CC6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 FP700111.2-201ENST00000619190 1892 ntBASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 UBE2DNL-204ENST00000602536 740 ntBASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 AC116050.2-201ENST00000612102 1779 ntBASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHBDF1Q96CC6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 AC091799.1-201ENST00000422823 811 ntBASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 AC026271.2-201ENST00000428091 497 ntBASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.06■□□□□ 0.8
RHBDF1Q96CC6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 AC092667.1-201ENST00000434301 2586 ntBASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 AC027702.1-201ENST00000563810 1770 ntBASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.05■□□□□ 0.8
RHBDF1Q96CC6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 MYCNOS-205ENST00000641950 531 ntBASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
RHBDF1Q96CC6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
RHBDF1Q96CC6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDF1Q96CC6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
RHBDF1Q96CC6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
RHBDF1Q96CC6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms