Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AC092119.3-201ENST00000612618 583 ntBASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 KRT16P2-201ENST00000414673 1423 ntBASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 COX11P1-201ENST00000489116 835 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 IFNL4P1-201ENST00000607083 540 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC144652.1-201ENST00000609974 1624 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC004870.1-201ENST00000315132 882 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AL691403.2-201ENST00000618460 490 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC011558.1-201ENST00000623459 338 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC092647.4-201ENST00000457211 535 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AP002469.2-201ENST00000531724 424 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 HLA-L-211ENST00000482052 1765 ntBASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SYNE2Q8WXH0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 FXN-202ENST00000396364 980 ntTSL 5 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SYNE2Q8WXH0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 MIR940-201ENST00000401276 94 ntBASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms