Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 LINC01521-201ENST00000504184 1943 ntBASIC21.05■□□□□ 0.96
SCG3Q8WXD2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 AC104187.1-201ENST00000607510 612 ntBASIC21.04■□□□□ 0.96
SCG3Q8WXD2 AC011767.1-201ENST00000617410 1153 ntBASIC21.04■□□□□ 0.96
SCG3Q8WXD2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SCG3Q8WXD2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCG3Q8WXD2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.02■□□□□ 0.96
SCG3Q8WXD2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCG3Q8WXD2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 HLA-L-209ENST00000420110 1011 ntBASIC21.01■□□□□ 0.95
SCG3Q8WXD2 AC006970.2-201ENST00000450065 779 ntBASIC21.01■□□□□ 0.95
SCG3Q8WXD2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCG3Q8WXD2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SCG3Q8WXD2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21■□□□□ 0.95
SCG3Q8WXD2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21■□□□□ 0.95
SCG3Q8WXD2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SCG3Q8WXD2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21■□□□□ 0.95
SCG3Q8WXD2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21■□□□□ 0.95
SCG3Q8WXD2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21■□□□□ 0.95
SCG3Q8WXD2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 RAP2CP1-201ENST00000605103 478 ntBASIC21■□□□□ 0.95
SCG3Q8WXD2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21■□□□□ 0.95
SCG3Q8WXD2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SCG3Q8WXD2 AF106564.1-201ENST00000607058 2553 ntBASIC21■□□□□ 0.95
SCG3Q8WXD2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms