Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 AC092368.3-202ENST00000574180 1591 ntBASIC22.55■■□□□ 1.2
TMEM40Q8WWA1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 AC142381.4-202ENST00000563973 229 ntBASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMEM40Q8WWA1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 UNC93B4-201ENST00000505679 747 ntBASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 AL117328.2-201ENST00000624617 1940 ntBASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TMEM40Q8WWA1 EP400NL-214ENST00000641289 2402 ntBASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM40Q8WWA1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TMEM40Q8WWA1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 AC087633.2-202ENST00000565166 1439 ntBASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TMEM40Q8WWA1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 AC233263.1-201ENST00000578059 224 ntBASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEM40Q8WWA1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM40Q8WWA1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms