Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 AL034346.1-201ENST00000568244 1277 ntBASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 BHLHE23-202ENST00000612929 1109 ntBASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMIM11BQ8TCY0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 U85056.1-201ENST00000616429 682 ntBASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM11BQ8TCY0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 TCF3P1-201ENST00000423021 1937 ntBASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 DUX4L18-201ENST00000553347 1267 ntBASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM11BQ8TCY0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SMIM11BQ8TCY0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms