Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLL1Q8TB92 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 GABARAPL3-202ENST00000624044 1851 ntBASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.25■□□□□ 0.83
HMGCLL1Q8TB92 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCLL1Q8TB92 AC006128.1-201ENST00000624704 1661 ntBASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 IKBKGP1-201ENST00000612193 1073 ntBASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGCLL1Q8TB92 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 AL137784.2-201ENST00000607332 1000 ntBASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 AC243732.1-201ENST00000612648 864 ntBASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLL1Q8TB92 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 MFSD11-216ENST00000590393 1141 ntBASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 AC092666.2-201ENST00000613287 246 ntBASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 BID-214ENST00000617586 542 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms