Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01560Q8TB33 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 AC105020.6-201ENST00000621523 1217 ntBASIC17.91■□□□□ 0.46
LINC01560Q8TB33 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LINC01560Q8TB33 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 RN7SL471P-201ENST00000580476 299 ntBASIC17.9■□□□□ 0.46
LINC01560Q8TB33 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01560Q8TB33 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.89■□□□□ 0.46
LINC01560Q8TB33 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01560Q8TB33 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01560Q8TB33 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 AC242852.2-201ENST00000615738 1807 ntBASIC17.87■□□□□ 0.45
LINC01560Q8TB33 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 AC069544.1-201ENST00000609399 999 ntBASIC17.87■□□□□ 0.45
LINC01560Q8TB33 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01560Q8TB33 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms