Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC27.36■■□□□ 1.97
CCDC146Q8IYE0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 AC011484.1-201ENST00000377652 1995 ntBASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC146Q8IYE0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 AC007322.3-201ENST00000426526 701 ntBASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CCDC146Q8IYE0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 AC093787.1-201ENST00000450396 207 ntBASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC146Q8IYE0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC146Q8IYE0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CCDC146Q8IYE0 AC006128.1-201ENST00000624704 1661 ntBASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 AC006970.2-201ENST00000450065 779 ntBASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms