Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 KRT18P14-201ENST00000534205 1250 ntBASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 AC120498.10-201ENST00000621827 505 ntBASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L2-201ENST00000561772 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 AP001160.3-201ENST00000601484 763 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L6-201ENST00000626483 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L1-201ENST00000627662 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L8-201ENST00000629013 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L3-201ENST00000630187 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L7-201ENST00000630678 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 DUX4L5-201ENST00000630834 1275 ntBASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINC00346Q8IVM7 AC011484.1-201ENST00000377652 1995 ntBASIC18.21■□□□□ 0.5
LINC00346Q8IVM7 AP005212.1-201ENST00000581547 1997 ntBASIC18.21■□□□□ 0.5
LINC00346Q8IVM7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 RARRES2P11-201ENST00000635158 484 ntBASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 KRT16P2-201ENST00000414673 1423 ntBASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00346Q8IVM7 AC027702.1-201ENST00000563810 1770 ntBASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 AC245052.3-201ENST00000450182 901 ntBASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 AC004854.2-201ENST00000608450 1441 ntBASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00346Q8IVM7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms