Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 AC009102.2-201ENST00000606772 1639 ntBASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYSMD2Q8IV50 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 AC103834.1-201ENST00000520383 144 ntBASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 AC121338.2-201ENST00000622535 1744 ntBASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD2Q8IV50 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD2Q8IV50 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD2Q8IV50 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 AP004607.7-201ENST00000527152 1677 ntBASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 AC079089.2-201ENST00000531211 1277 ntBASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 ABHD17AP5-201ENST00000580133 923 ntBASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 LTB4R2-202ENST00000528054 3092 ntBASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD2Q8IV50 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms