Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 TERF1P5-201ENST00000477545 1207 ntBASIC19.28■□□□□ 0.68
RTL4Q6ZR62 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.28■□□□□ 0.68
RTL4Q6ZR62 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.27■□□□□ 0.68
RTL4Q6ZR62 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.27■□□□□ 0.68
RTL4Q6ZR62 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTL4Q6ZR62 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTL4Q6ZR62 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTL4Q6ZR62 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTL4Q6ZR62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTL4Q6ZR62 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTL4Q6ZR62 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 AC005181.1-201ENST00000604782 1256 ntBASIC19.26■□□□□ 0.67
RTL4Q6ZR62 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL4Q6ZR62 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 CNN2P6-201ENST00000439038 900 ntBASIC19.25■□□□□ 0.67
RTL4Q6ZR62 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RTL4Q6ZR62 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 RNF165-205ENST00000588679 2904 ntBASIC19.24■□□□□ 0.67
RTL4Q6ZR62 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL4Q6ZR62 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 HLA-L-209ENST00000420110 1011 ntBASIC19.23■□□□□ 0.67
RTL4Q6ZR62 NCF1B-203ENST00000435988 1254 ntBASIC19.23■□□□□ 0.67
RTL4Q6ZR62 AC007322.4-201ENST00000509611 723 ntBASIC19.23■□□□□ 0.67
RTL4Q6ZR62 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL4Q6ZR62 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms