Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCNI2Q6ZMN8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 AC087289.5-201ENST00000586076 3175 ntBASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCNI2Q6ZMN8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 CCDC92B-201ENST00000575506 885 ntBASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNI2Q6ZMN8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 AC112907.3-201ENST00000577781 2400 ntBASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 AL162377.1-201ENST00000618844 1793 ntBASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCNI2Q6ZMN8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNI2Q6ZMN8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNI2Q6ZMN8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.77■■□□□ 1.07
CCNI2Q6ZMN8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.77■■□□□ 1.07
CCNI2Q6ZMN8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
CCNI2Q6ZMN8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.77■■□□□ 1.07
CCNI2Q6ZMN8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCNI2Q6ZMN8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 MIR6084-201ENST00000622012 110 ntBASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNI2Q6ZMN8 AL020996.1-203ENST00000536896 2307 ntBASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 AL354811.1-201ENST00000610286 706 ntBASIC21.75■■□□□ 1.07
CCNI2Q6ZMN8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms